Mikhail Pyatnitskiy
- Associate Professor:Faculty of Computer Science / Department of Complex System Modelling Technologies
- Mikhail Pyatnitskiy has been at HSE University since 2017.
Education and Degrees
- 2009
Candidate of Sciences* (PhD)
- 2006
Degree
Russian State Medical University
* Candidate of Sciences
According to the International Standard Classification of Education (ISCED) 2011, Candidate of Sciences belongs to ISCED level 8 - "doctoral or equivalent", together with PhD, DPhil, D.Lit, D.Sc, LL.D, Doctorate or similar. Candidate of Sciences allows its holders to reach the level of the Associate Professor.
According to the International Standard Classification of Education (ISCED) 2011, Candidate of Sciences belongs to ISCED level 8 - "doctoral or equivalent", together with PhD, DPhil, D.Lit, D.Sc, LL.D, Doctorate or similar. Candidate of Sciences allows its holders to reach the level of the Associate Professor.
Courses (2023/2024)
- Systems Biology and Personalized Medicine (Master’s programme; Faculty of Computer Science; 2 year, 1, 2 module)Rus
- Past Courses
Courses (2022/2023)
Systems Biology and Personalized Medicine (Master’s programme; Faculty of Computer Science; 2 year, 1, 2 module)Rus
Courses (2021/2022)
Systems Biology and Personalized Medicine (Master’s programme; Faculty of Computer Science; 2 year, 1, 2 module)Rus
Courses (2020/2021)
Systems Biology and Personalized Medicine (Master’s programme; Faculty of Computer Science; 2 year, 1, 2 module)Rus
Courses (2019/2020)
Systems Biology and Personalized Medicine (Master’s programme; Faculty of Computer Science; 2 year, 1, 2 module)Rus
Publications16
- Article Kopylov A., Ponomarenko E., Ilgisonis E., Pyatnitskiy M., Lisitsa A., Poverennaya E., Kiseleva O., Farafonova T., Tikhonova O., Zavialova M., Novikova S., Moshkovskii S., Radko S., Morukov B., Grigoriev A., Paik Y., Salekdeh G., Urbani A., Zgoda V., Archakov A. 200+ Protein Concentrations in Healthy Human Blood Plasma: Targeted Quantitative SRM SIS Screening of Chromosomes 18, 13, Y, and the Mitochondrial Chromosome Encoded Proteome // Journal of Proteome Research. 2019. Vol. 18. No. 1. P. 120-129. doi
- Article Tarkhov A., Alla R., Ayyadevara S., Pyatnitskiy M., Menshikov L., Shmookler Reis R., Fedichev P. A universal transcriptomic signature of age reveals the temporal scaling of Caenorhabditis elegans aging trajectories // Scientific Reports. 2019. Vol. 9. No. 1. P. 1-18. doi
- Article Levitsky L., Kliuchnikova A., Kuznetsova K., Karpov D., Ivanov M., Pyatnitskiy M., Kalinina O., Gorshkov M., Moshkovskii S. Adenosine-to-Inosine RNA Editing in Mouse and Human Brain Proteomes // Proteomics. 2019 doi (in press)
- Article Kuznetsova K., Ivanov M., Pyatnitskiy M., Levitsky L., Ilina I., Chernobrovkin A., Zubarev R., Gorshkov M., Moshkovskii S. Brain Proteome of Drosophila melanogaster Is Enriched with Nuclear Proteins // Biochemistry. Biokhimiia. 2019. Vol. 84. No. 1. P. 71-78. doi
- Article Vakhrushev I., Yusupov V., Raeva O., Pyatnitskiy M., Bagratashvili V. Effect of Low-Level Laser Irradiation on Proliferative Activity of Wharton's Jelly Mesenchymal Stromal Cells / Пер. с рус. // Bulletin of Experimental Biology and Medicine. 2019. Vol. 167. No. 1. P. 136-139. doi
- Article Pyrkov T., Slipensky K., Barg M., Kondrashin A., Zhurov B., Zenin A., Pyatnitskiy M., Menshikov L., Markov S., Fedichev P. Extracting biological age from biomedical data via deep learning: too much of a good thing? // Scientific Reports. 2018. Vol. 8. No. 1. P. 1-11. doi
- Article Lobas A., Pyatnitskiy M., Chernobrovkin A., Ilina I., Karpov D., Solovyeva E., Kuznetsova K., Ivanov M., Lyssuk E., Kliuchnikova A., Voronko O., Larin S., Zubarev R., Gorshkov M., Moshkovskii S. Proteogenomics of malignant melanoma cell lines: the effect of stringency of exome data filtering on variant peptide identification in shotgun proteomics // Journal of Proteome Research. 2018. Vol. 17. No. 5. P. 1801-1811. doi
- Article Pyrkov T., Getmantsev E., Zhurov B., Avchaciov K., Pyatnitskiy M., Menshikov L., Khodova K., Gudkov A., Fedichev P. Quantitative characterization of biological age and frailty based on locomotor activity records // Aging. 2018. Vol. 10. No. 10. P. 2973-2990. doi
- Article Пятницкий М. А., Карпов Д., Мошковский С. Подходы к поиску критически важных генов в раковом геноме // Биомедицинская химия. 2018. Т. 64. № 4. С. 303-314. doi
- Article Вахрушев И., Новикова С., Цветкова А., Пятницкий М. А., Ярыгин К. Сравнительное протеомное профилирование ядерной и цитозольной фракций клеточных линий различного происхождения // Биомедицинская химия. 2018. Т. 64. № 3. С. 233-240. doi
- Article Petushkova N., Zgoda V., Pyatnitskiy M., Larina O., Teryaeva N., Potapov A., Lisitsa A. Post-translational modifications of FDA-approved plasma biomarkers in glioblastoma samples // Plos One. 2017. Vol. 12. No. 5. P. 0177427-1-0177427-21. doi
- Article Петушкова Н., Русанов А., Згода В., Пятницкий М. А., Ларина О., Наход К., Лузгина Н., Лисица А. Протеом кератиноцитов человека линии HаCаT: идентификация белков окислительного стресса при воздействии додецилсульфата натрия // Молекулярная биология. 2017. Т. 51. № 5. С. 857-869. doi
- Article Kliuchnikova A., Samokhina N., Ilina I., Karpov D., Pyatnitskiy M., Kuznetsova K., Toropygin I., Kochergin S., Alekseev I., Zgoda V., Archakov A., Moshkovskii S. Human aqueous humor proteome in cataract, glaucoma and pseudoexfoliation syndrome // Proteomics. 2016. Vol. 16. No. 13. P. 1938-1946. doi
- Article Kotelnikova E., Pyatnitskiy M., Paleeva A., Kremenetskaya O., Vinogradov D. Practical aspects of NGS-based pathways analysis for personalized cancer science and medicine. // Oncotarget. 2016. Vol. 7. No. 32. P. 52493-52516. doi
- Article Ponomarenko E., Poverennaya E., Ilgisonis E., Pyatnitskiy M., Kopylov A., Zgoda V., Lisitsa A., Archakov A. The Size of the Human Proteome: The Width and Depth // International Journal of Analytical Chemistry. 2016. P. 1-6. doi
- Article Kuznetsova K., Trufanov P., Moysa A., Pyatnitskiy M., Zgoda V., Gorshkov M., Moshkovskii S. Threonine versus isothreonine in synthetic peptides analyzed by high-resolution liquid chromatography/tandem mass spectrometry // Rapid Communications in Mass Spectrometry. 2016. Vol. 30. No. 11. P. 1323-1331. doi